300045 VO Bioinformatics for the analysis of microbial genomes, metagenomes and metatranscriptomes (2024S)
Labels
Registration/Deregistration
Note: The time of your registration within the registration period has no effect on the allocation of places (no first come, first served).
Details
Language: German
Examination dates
- Wednesday 26.06.2024 11:30 - 13:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 16.10.2024 15:00 - 16:30 Hörsaal 3, Biologie Djerassiplatz 1, 0.005, Ebene 0
- Wednesday 11.12.2024 15:00 - 16:30 Hörsaal 3, Biologie Djerassiplatz 1, 0.005, Ebene 0
- Wednesday 15.01.2025 15:00 - 16:30 Hörsaal 3, Biologie Djerassiplatz 1, 0.005, Ebene 0
Lecturers
Classes (iCal) - next class is marked with N
- Wednesday 06.03. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 13.03. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 20.03. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 10.04. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 17.04. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 24.04. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 08.05. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 15.05. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 22.05. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 29.05. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 05.06. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 12.06. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
- Wednesday 19.06. 11:30 - 14:00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1
Information
Aims, contents and method of the course
This lecture provides an overview on bioinformatics methods for the analysis of prokaryotic genomes, metagenomes and metatranscriptomes. Both established methods and tools, e.g. for gene prediction or functional and structural classification of proteins, and newly developed methods, e.g. for inferring functions from genomic associations, will be explained and discussed. Practical exercises will demonstrate the application of selected software tools to typical problems.
Assessment and permitted materials
Written exam dates (open-book: all written/printed material may be used):
26.6. 2024 11.30-13.00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1 1.010
October 2024, Biologie Djerassiplatz 1, Date and Room TBA
December 2024, Biologie Djerassiplatz 1, Date and Room TBA
January 2025, Biologie Djerassiplatz 1, Date and Room TBA
26.6. 2024 11.30-13.00 Seminarraum 1.7, Biologie Djerassiplatz 1, 1.010, Ebene 1 1.010
October 2024, Biologie Djerassiplatz 1, Date and Room TBA
December 2024, Biologie Djerassiplatz 1, Date and Room TBA
January 2025, Biologie Djerassiplatz 1, Date and Room TBA
Minimum requirements and assessment criteria
Understanding typical problems in microbial genomics, metagenomics and metatranscriptomics. Application of bioinformatic methods for solving these problems and interpretation of the results in the biological context.Evaluation scale of written exam:
<50%: 5
<62.5%: 4
<75%: 3
<87.5%: 2
>=87.5%: 1
<50%: 5
<62.5%: 4
<75%: 3
<87.5%: 2
>=87.5%: 1
Examination topics
Presentation and discussion of selected topics. Lecture in German with english material. Homework exercises.
Reading list
Will be provided during the lecture on the elearning platform.
Association in the course directory
BOE 9
Last modified: Tu 25.06.2024 07:26